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PSI-BLAST tutorial

Abstract PSI-BLAST (Position-Specific Iterative Basic Local Alignment Search Tool) derives a position-specific scoring matrix (PSSM) or profile from the

Gapped Blast and psi blast basic Local Alignment Search Tool

Gapped Blast and psi blast basic Local Alignment Search Tool

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[Blast] PSI-BLAST with multiple-seperate output PSSM file

Ive encountered a problem when generating PSSM from multiple-sequence query with PSI-BLAST. I want to have a query with single PSSM output for each

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Family-by-family comparison of PSI-BLAST OMCL NM and PSI-

Family-by-family comparison of PSI-BLAST OMCL NM and PSI-BLAST OMCL MP kernels after modified symmetry based updation.Ujjwal Maulik

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PSI‐BLAST

Definition PSI‐BLAST stands for Position‐Specific Iterated BLAST . Following a standard BLAST (searching tool for nucleotide and protein homologs to a

PSI BLAST

PSI BLASTdoi:10.1002/9780471650126.dob0594.pub2This article has no abstract.Dictionary of Bioinformatics and Computational BiologyDov Greenbaum

BLASTP/PSI-BLAST

This web interface to PSI-BLAST is meant to be used in conjunction with the MSA hub. To make a proficient use of this service, new users are warmly

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The complete list of PSI-BLAST hits using a sequence alignment of known C. elegan Rabs.Maria E. GallegosSanjeev Balakrishnan

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e-Value Distributions for SUPERFAMILY (SF) and PSI-BLAST (PB)

e-Value Distributions for SUPERFAMILY (SF) and PSI-BLAST (PB) Assignments and OccurrencesSanne AbelnCarlo TeubnerCharlotte M Deane

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Benchmarking PSI-BLAST in genome annotation1

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Grouping of genes used in the query of the PSI-BLAST search.

Grouping of genes used in the query of the PSI-BLAST search.Bin YangKatsuhisa OzakiYukio IshikawaTakashi Matsuo

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PSIBLAST_PairwiseStatSig

which motivates its use to refine PSI-BLAST results, since PSI-BLAST also constructs a position-specific substitution matrix for the query sequence during